Differences

This shows you the differences between two versions of the page.

--- informatica:hp_z240mt_offstation_configuracio [2017/08/07 12:34]
miquel [Biblioteques no trobades]
+++ informatica:hp_z240mt_offstation_configuracio [2017/08/07 16:28] (current)
miquel [expinstall]
@@ Line 1: / Line 1: @@
 ====== Configuració del ParaVision ======
-En realitat, no es tracta de configurar el ParaVision, sinó de
+Un cop resolts els problemes que impedien que funcionés el programa, el primer cop que provo a executar el programa surt un missatge on indica que la primera vegada que s'executa el programa cal fer-ho com a NMR Superuser,
-  * crear els usuaris i grups necessaris per córrer el programa;
-  * d'ajustar els permisos i propietaris de les carpetes del programa; i
-  * de crear els fitxers i variables d'entorn necessàries perquè el programa funcioni correctament.
-===== Usuaris i grups =====
-Aquests són els usuaris i grups relacionats amb el ParaVision a l'ordinador antic que s'hauran de crear al nou ordinador,
 <file>
-[root@sermn112 PV5.1]# cat /etc/passwd
+sermnadmin@sermn115:/opt/PV5.1$ ./pv
-root:x:0:0:root:/root:/bin/bash
+Available disk memory for ParaVision is 40Gbytes. The partition load is 59%
-...
-mri:x:500:500:SeRMN Users:/home/mri:/bin/bash
-nmrsu:x:501:501:Bruker Topspin/ParaVision Superuser:/home/nmrsu:/bin/bash
-flexlm:x:502:502:FLEXlm Licence Manager:/nonexistent:/bin/sh
+Network Consistency Check : seems to be OK, ParaVision can be started
-[root@sermn112 PV5.1]# cat /etc/shadow
-...
-mri:<password>:13998:0:99999:7:::
-nmrsu:<password>:14407:0:99999:7:::
-flexlm:!!:13998:0:99999:7:::
-[root@sermn112 PV5.1]# cat /etc/group
-...
-mri:x:500:
-nmrsu:x:501:nmrsu,mri
-flexlm:x:502:flexlm
-</file>
-Un cop creats, el resultat és:
-<file>
-root@cie-50-189:/etc# tail -2 /etc/passwd
-nmrsu:x:1003:1003:Bruker TopSpin/ParaVision Superuser:/home/nmrsu:/bin/bash
-flexlm:x:1004:1004:FLEXlm Licence Manager:/nonexistent:/bin/sh
-root@cie-50-189:/etc# tail -2 /etc/group
-nmrsu:x:1003:sermnmri
-flexlm:x:1004:
-root@cie-50-189:/etc# tail -2 shadow
-nmrsu:<password>:17381:0:99999:7:::
-flexlm:!!:17381:0:99999:7:::
-</file>
-===== Canvi de propietaris de les carpetes i fitxerrs =====
-La transferència de les carpetes i fitxers amb els permisos i propietaris que hi havia a l'antic ordinador, ha fet que es mantinguin els UID/GID originals dels fitxers i que ara sigui necessari corregir-los, per exemple, amb la comanda,
-<file>
-# cd /opt/PV5.1
-# find . -type d -uid 501 -exec chown nmrsu:nmrsu {} \;
-</file>
-===== Definició dels serveis locals de Bruker =====
-Cal afegir les següents línies al final del fitxer ///etc/services// per definir els serveis locals de Bruker,
-<file>
-# Local services
-bfs		2201/udp	# BRUKER: bootfileserver
-bruker_ls	1700/tcp	# FLEXlm licensing for Bruker
-bbmri_ls	1700/tcp	# FLEXlm licensing for Bruker
-</file>
-===== Configuració del kernel =====
-<WRAP important>Comprovar si cal mantenir aquesta configuració
-</WRAP>
-A l'antiga instal·lació hi ha la següent línia al fitxer ///etc/sysctl.conf// per configurar la memòria compartida que no aplico per ara.
-<file>
-# kernel.shmmax: Set shared memory size to total memory size (for BRUKER TOPSPIN, ParaVision).
-kernel.shmmax = 1052028928
-</file>
-===== installpv - ParaVision post-installation script =====
-Executo la comanda ''installpv'' per comprovar/corregir/completar la instal·lació del ParaVision,
-<file>
-root@cie-50-189:/opt/PV5.1/prog/bin# ./installpv /opt/PV5.1 nmrsu
-Environment variable XWINNMRHOME defaults to /opt/PV5.1
----------------------------------------------------------------------------
-installpv for ParaVision running under LINUX 4.6.0-0.bpo.1-amd64
-Current installation script version :
-$Id: installpv,v 1.305.2.54 2010/04/21 12:40:09 cwe Exp $
----------------------------------------------------------------------------
-your selections are:
-    ParaVision installation path : /opt/PV5.1
-    The NMR Superuser will be    : nmrsu
-++++
-INFO    (Fri Aug  4 10:39:48 2017)
-++++
-Validating NMR Superuser ...
-++++
-INFO    (Fri Aug  4 10:39:48 2017)
-++++
-NMR Administration Password for special privileges
-Nothing to do
-++++
-INFO    (Fri Aug  4 10:39:48 2017)
-++++
-Full TopSpin version found, continuing with normal installation procedure
-..
-++++
-INFO    (Fri Aug  4 10:39:48 2017)
-++++
-Call cf/expinstall after first start
-++++
-INFO    (Fri Aug  4 10:39:48 2017)
-++++
-Creating/removing some directories ...
-++++
-INFO    (Fri Aug  4 10:39:48 2017)
-++++
-Make symbolic links for Inventor ...
-++++
-INFO    (Fri Aug  4 10:39:48 2017)
-++++
-Create dump file for java shared classes ...
-++++
-INFO    (Fri Aug  4 10:39:49 2017)
-++++
-Make symbolic links for System Libs in /opt/PV5.1/prog/pvshlib ...
-++++
-INFO    (Fri Aug  4 10:39:49 2017)
-++++
-Make symbolic links for System Libs in /opt/PV5.1/prog/shlib ...
-++++
-INFO    (Fri Aug  4 10:39:49 2017)
-++++
-Check OpenGL support...
-!!!!!!!
-WARNING (Fri Aug  4 10:39:49 2017)
-!!!!!!!
-No suitable OpenGL driver found; installing MESA, if not present...
-++++
-INFO    (Fri Aug  4 10:39:49 2017)
-++++
-Running post-installation scripts ...
-++++
-INFO    (Fri Aug  4 10:39:49 2017)
-++++
-Adjusting Makefiles in exported parameter sources ...
-++++
-INFO    (Fri Aug  4 10:39:49 2017)
-++++
-installpv detected an already existing ParaVision Configuration, OK
-++++
-INFO    (Fri Aug  4 10:39:49 2017)
-++++
-Install default datastation configuration ...
-++++
-INFO    (Fri Aug  4 10:39:50 2017)
-++++
-Setting up CORBA Name Service for default distribution ...
-++++
-INFO    (Fri Aug  4 10:39:50 2017)
-++++
-CORBA Name Service is not running at the moment ...
-++++
-INFO    (Fri Aug  4 10:39:50 2017)
-++++
-Configuring CORBA Name Service ...
-++++
-INFO    (Fri Aug  4 10:39:50 2017)
-++++
-Starting new CORBA Name Service ...
-nohup: ignoring input and redirecting stderr to stdout
-++++
-INFO    (Fri Aug  4 10:39:55 2017)
-++++
-Answer is : Starting CORBA name service: -e done
-++++
-INFO    (Fri Aug  4 10:39:55 2017)
-++++
-nmrsu    12550     1  6 10:39 ?        00:00:00
-/opt/PV5.1/jre1.6.0_13/bin/orbd -J-server -J-Xmx16m
--J-Dcom.sun.CORBA.transport.ORBUseNIOSelectToWait=false -ORBInitialPort 12345 -defaultdb /var/log/CORBA
-root     12573 12438  0 10:39 pts/3    00:00:00 sh -c ps -efw | grep orbd
-root     12575 12573  0 10:39 pts/3    00:00:00 grep orbd
-++++
-INFO    (Fri Aug  4 10:39:55 2017)
-++++
-Checking/setting overcommit policy for processes ...
-++++
-INFO    (Fri Aug  4 10:39:55 2017)
-++++
-Updating permissions of ParaVision/TopSpin ...
-..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
-++++
-INFO    (Fri Aug  4 10:39:57 2017)
-++++
-Creating checksum file for installation ...
-find: `/tftpboot': No such file or directory
-++++
-INFO    (Fri Aug  4 10:40:34 2017)
-++++
-/opt/PV5.1/prog/service/chkpv.pl:
-( $Id: chkpv.pl,v 1.10.2.1 2009/10/20 12:28:31 roe Exp $)
-freezing PV file tree /opt/PV5.1 of version 5.1 ...
-================================================
-Results for snapshot of version /opt/PV5.1
-================================================
-Checksum file /opt/PV5.1/prog/service/configuration.md5 from Fri
-Aug  4 10:40:34 2017
-++++
-INFO    (Fri Aug  4 10:40:34 2017)
-++++
-ParaVision post-installation (SETUP) succeeded
-</file>
-===== installnmr - TopSpin post-installation script =====
-Executo la comanda ''installnmr'' per comprovar/corregir/completar la instal·lació del TopSpin,
-<file>
-root@cie-50-189:/opt/PV5.1# ./prog/bin/installnmr -h
-Usage:
-    installnmr [-option ...] <Installation Path> <NMR-superuser>
-	-encrypted <string>
-	-help
-	-noadmincheck
-	-secure
-	-useinstalled
-	-verbose+
- Hit <Enter> to continue ...
-root@cie-50-189:/opt/PV5.1# ./prog/bin/installnmr -useinstalled
-*---------------------------------*
- TOPSPIN 2.0PV processing package
-*---------------------------------*
-Update permissions of ALL TOPSPIN FILES...
-installation of TOPSPIN version processing package
-continue with acquisition
-*----------------------------------*
- TOPSPIN ts_2_0 acquisition package
-*----------------------------------*
-... installing helevtransfer ...
-- A copy of the original crontab file for user nmrsu is stored in
-  /opt/PV5.1/cronfile.nmrsu.orig
-... installation of helevtransfer finished.
- File /opt/PV5.1/conf/instr/curinst exists!
- 'cf' already done for Datastation
-installation of TOPSPIN acquisition VS ts_2_0 finished
-exit: 0
-</file>
-===== Reset del NMR Administration Password =====
-Per algun motiu, no aconsegueixo que el programa //installnmr// accepti cap de les contrasenyes que fem servir habitualment com a NMR Administration Password, de forma que la reinicio segons es detalla a la //TopSpin 1.3 Installation Guide Linux.// Primer esborro el fitxer que conté el la contrasenya actual,
-<file>
-root@cie-50-189:/etc/init.d# cd /opt/PV5.1/
-root@cie-50-189:/opt/PV5.1# rm /opt/PV5.1/conf/nmradminpassword
-</file>
-i després en creo una de nova,
-<file>
-root@cie-50-189:/opt/PV5.1# ./prog/bin/installnmr /opt/PV5.1 nmrsu
-*---------------------------------*
- TOPSPIN 2.0PV processing package
-*---------------------------------*
-New password:
-Retype new password:
-Update permissions of ALL TOPSPIN FILES...
-installation of TOPSPIN version processing package
-continue with acquisition
-*----------------------------------*
- TOPSPIN ts_2_0 acquisition package
-*----------------------------------*
-... installing helevtransfer ...
-- A copy of the original crontab file for user nmrsu is stored in
-  /opt/PV5.1/cronfile.nmrsu.orig
-... installation of helevtransfer finished.
- File /opt/PV5.1/conf/instr/curinst exists!
- 'cf' already done for Datastation
-installation of TOPSPIN acquisition VS ts_2_0 finished
-exit: 0
-</file>
-===== Comprovar la integritat de la instal·lació del ParaVision =====
-Faig servir el programa ///~paravision/prog/service/chkpv.pl// per comprovar la integritat de la instal·lació,
-<file>
-root@cie-50-189:/opt/PV5.1# ./prog/service/chkpv.pl --verify /opt/PV5.1/
-./prog/service/chkpv.pl:
-( $Id: chkpv.pl,v 1.10.2.1 2009/10/20 12:28:31 roe Exp $)
-Test started at Fri Aug  4 11:51:48 2017 for PV version 5.1
-verifying /opt/PV5.1/ with file /opt/PV5.1//prog/service/configuration.md5, please wait ...
-================================================
-Integrity check results for /opt/PV5.1/
-================================================
-Test finished at Fri Aug  4 11:51:51 2017
-Checksum file from Fri Aug  4 10:40:34 2017
-NUMBER OF FILES MODIFIED OR REMOVED: 46
-: /opt/PV5.1/prog/service/integrity.log : MODIFIED
-	last modification at Fri Aug  4 11:51:51 2017
-: /opt/PV5.1/prog/service/configuration.md5 : MODIFIED
-	last modification at Fri Aug  4 10:40:34 2017
-: /opt/PV5.1/prog/au/bin/DemoGetv : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/PVMepiAdjust : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/SvFidStab : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/SvRxDcTest : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/SvRxadDcTest : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/csi_filterAU : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/Combine_Spec : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/pvplot : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/gen_lut : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/au_spiraltraj : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/spi_au : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/csi_copy.au : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/SvRxAllTest : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/SvB0OffsetAu : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/au_polar : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/csi_cr.au : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/NoOperation : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/pfObserveGrad : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/CsiSplit3d : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/navig_pf : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/NmrMonitorExport : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/SvRxadDcAdj : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/SvRxDcAdj : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/CsiExtract1dSpc : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/NAV_pressAU : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/CalcLinewidth : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/IntraGateAu : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/DemoFio : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/csi_autopk.au : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/SvWobble : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/OverlayGrid : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/CsiExtract1dSer : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/FastmapAu : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/CsiSplitMSlices : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/au_epitraj : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/csi_trans.au : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/au_spiralregrid : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/SvCurProbe_au : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/spiralAU : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/NmrMonitorAu : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/csi_save.au : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/SvRxAllAdj : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/prog/au/bin/remove_zipper : REMOVED
-	after Thu Jan  1 01:00:00 1970
-: /opt/PV5.1/cronfile.nmrsu.orig : MODIFIED
-	last modification at Fri Aug  4 10:49:17 2017
-</file>
-<WRAP todo>
-Caldrà comprovar els fitxers que no s'han trobat o que s'han modificat
-</WRAP>
-===== La comanda 'source' no existeix al shell dash =====
-Els primers intents d'executar el ParaVision no han funcionat, de vegades amb missatges d'error que apuntaven a una instal·lació incompleta del ParaVision i/o del TopSpin, i que suggerien córrer de nou els scripts d'instal·lació ''installpv'' i/o ''installnmr''. Però per més que els he executat amb diferents opcions, el resultat ha estat sempre el mateix,
-<file>
-root@cie-50-189:/opt/PV5.1# /opt/PV5.1/pv
-ParaVision Home Directory points to /opt/PV5.1
-TopSpin Home Directory points to
-Hit <ENTER> to continue ...
-Not equal, installpv possibly not yet done!
-ParaVision cannot be started. Press the return key to continue:
-</file>
-Finalment, quan he provat d'executar directament el script ///opt/PV5.1/prog/bin/topspin//, he obtingut un missatge d'error informatiu,
-<file>
-root@cie-50-189:/opt/PV5.1# ./topspin
-./topspin: 115: ./topspin: source: not found
-./topspin: Error: Cannot find script './prog/bin/funclib.sh'
-Your TopSpin installation is probably corrupted.
-You have to run 'installnmr'.
-Hit <ENTER> to continue ...
-</file>
-on el missatge "./topspin: 115: ./topspin: source: not found" m'ha dut a comprovar quin shell s'estava emprant,
-<file>
-root@cie-50-189:/opt/PV5.1# ls -l /bin/sh
-lrwxrwxrwx 1 root root 4 Nov  8  2014 /bin/sh -> dash
-</file>
-i a trobar que la comanda ''source'' no està disponible al shell dash,
-  * [[https://bugs.launchpad.net/ubuntu/+source/dash/+bug/65046 | Dash doesn't understand "source"]]
-  * [[https://stackoverflow.com/questions/13702425/source-command-not-found-in-sh-shell | source command not found in sh shell]]
-  * [[https://askubuntu.com/questions/504546/error-message-source-not-found-when-running-a-script | Error message 'source: not found' when running a script]]
-i que **la solució** es substituir la comanda ''source <filename>'' per la seva equivalent a dash, el punt: ''. <filename>''
-===== Afegir sermnadmin al grup nmrsu =====
-Un cop resolt el problema amb la comanda ''source'', torno a provar d'engegar el ParaVision, i aquest cop em dona un error diferent:
-<file>
-sermnadmin@sermn115:/opt/PV5.1$ ./pv
-id: sermnadm: no such user
 *****
-ERROR   (Fri Aug  4 15:52:57 2017)
+ERROR   (Mon Aug  7 14:24:31 2017)
 *****
-The user sermnadm does not belong to the primary group of the NMR Superuser
+The first start of ParaVision includes the spectrometer configuration which
-nmrsu. This will lead to potential permission problems. Please add the
+has not yet been accomplished. It must be performed as NMR Superuser.
-primary group of nmrsu to the group list of user sermnadm.
+Please restart ParaVision with NMR Superuser rights (either re-login as
+user <Nmr
+Superuser>  or execute the shell command 'su <Nmr Superuser>')
 </file>
-Afegeixo //sermnadmin// al grup //nmrsu//, però el programa continua escurçant //sermnadmin// en //sermnadm// i com que no troba que pertanyi al grup //nmrsu//, el problema persisteix.
+Així doncs, surto de la sessió de //sermnadmin// i obro una sessió com a //nmrsu//, i executo ParaVision,
-===== Corregir la truncació de sermnadmin en sermnadm =====
-Amb l'ajut de la comanda ''strace -f -e execve /opt/PV5.1/pv'' trobo que l'error s'origina al fitxer //~paravision/prog/bin/startpv//, més concretament a la //Bruker Medical ParaVision Perl library//. Després d'examinar el fitxer //~paravision/perl/lib/perl5/Bruker/Medical/PvUtil.pm// trobo que la causa del problema està la funció ''GetUser()'', on es fa servir la funció ''POSIX::cuserid()'', la qual deu tornar el nom d'usuari truncat a 8 caràcters. Per resoldre el problema substitueixo la funció ''cuserid()'' per la resposta més recomanada a la pregunta [[https://stackoverflow.com/questions/1378221/how-can-i-get-name-of-the-user-executing-my-perl-script | How can I get name of the user executing my Perl script?]]
-<code Perl>
-#--------------------------------------------------------------------------
-# function:     GetUser
-# returns the user name of the user who started the script
-# parameters:   none
-# returns local user name
-#--------------------------------------------------------------------------
-sub GetUser
-{
-    if (GetOperatingSystem() eq 'Windows_NT')
-    {
-        eval 'use Win32';
-        return Win32::LoginName;
-    }
-    else
-    {
-        # 20180805 - MCE - POSIX::cuserid() REPLACED
-        # POSIX::cuserid() replaced because it seems to truncate the username to
-        # eight characters causing ParaVision to abort at start-up whenever the
-        # username is longer than 8 chars. I apply the recommended answer from
-        # https://stackoverflow.com/questions/1378221/how-can-i-get-name-of-the-user-executing-my-perl$
-        #
-        ## return POSIX::cuserid();
-        my $username = $ENV{LOGNAME} || $ENV{USER} || getpwuid($<);
-        return $username;
-    }
-}
-</code>
-Amb això aconsegueixo que finalment s'executi el programa.
-===== Instal·lació de biblioteques addicionals - 1a part =====
-==== libomniORB4, libomniDynamic4 i libomnithread ====
-Al següent intent d'executar ParaVision dóna un error perquè no troba unes biblioteques relacionades amb el CORBA,
 <file>
-nmrsu@sermn115:/opt/PV5.1$ ldd /opt/PV5.1/prog/bin/pvcmd
+nmrsu@sermn115:/opt/PV5.1$ ./pv
-	linux-gate.so.1 (0xf77c9000)
+Available disk memory for ParaVision is 40Gbytes. The partition load is 59%
-	libomniORB4.so.0 => not found
-	libomniDynamic4.so.0 => not found
-	libomnithread.so.3 => not found
-	libpthread.so.0 => /lib/i386-linux-gnu/i686/cmov/libpthread.so.0 (0xf778c000)
-	libpcre.so.0 => not found
-	libdl.so.2 => /lib/i386-linux-gnu/i686/cmov/libdl.so.2 (0xf7787000)
-	librt.so.1 => /lib/i386-linux-gnu/i686/cmov/librt.so.1 (0xf777e000)
-	libstdc++.so.6 => /usr/lib32/libstdc++.so.6 (0xf768b000)
-	libm.so.6 => /lib/i386-linux-gnu/i686/cmov/libm.so.6 (0xf7645000)
-	libgcc_s.so.1 => /lib/i386-linux-gnu/libgcc_s.so.1 (0xf7628000)
-	libc.so.6 => /lib/i386-linux-gnu/i686/cmov/libc.so.6 (0xf747b000)
-	/lib/ld-linux.so.2 (0x565f5000)
-</file>
-Instal·lo els paquets que contenen les biblioteques que manquen:
+Network Consistency Check : seems to be OK, ParaVision can be started
-  * libomniorb4-1:i386 que conté libomniORB4.so.1
-    * caldrà crear un enllaç simbòlic de nom libomniORB4.so.0
-    * arrossega el paquet libomnithread3c2:i386 que conté libomnithread.so.3
-  * libpcre:i386 que conté libpcre.so.3
-    * caldrà crear un enllaç simbòlic de nom libpcre3.so.0
-i creo un enllaça símbolic pel cas de la biblioteca libomniDynamic4.so.0 que ja està instal·lada,
+/opt/PV5.1/topspin  -developer -paravision
+CPR : Path to prog : "/opt/PV5.1/prog"
-<file>
+CPR : Path to exp  : "/opt/PV5.1/exp"
-root@sermn115:/opt/PV5.1/prog/bin# apt-get install libomniorb4-1:i386
+CPR : Path to conf : "/opt/PV5.1/conf"
-Reading package lists... Done
+PVSTARTUP checkout in pvCmd : Your FLEXlm license for PVSTARTUP version 5.000 is valid until 5-mar-2034
-Building dependency tree
+Turning on modules:
-Reading state information... Done
+	org.openide.util [6.8.31 200704122300]
-The following package was automatically installed and is no longer required:
+	org.openide.modules [6.5.31 200704122300]
-  libgconf2-4
+	org.openide.filesystems [6.4.31 200704122300]
-Use 'apt-get autoremove' to remove it.
+	org.openide.awt [6.7.31 200704122300]
-The following extra packages will be installed:
+	org.openide.options [6.4.31 200704122300]
-  libomnithread3c2:i386
+	org.openide.dialogs [6.5.31 200704122300]
-The following NEW packages will be installed:
+	org.openide.nodes [6.7.31 200704122300]
-  libomniorb4-1:i386 libomnithread3c2:i386
+	org.openide.explorer [6.5.31 1 200704122300]
-upgraded, 2 newly installed, 0 to remove and 0 not upgraded.
+	org.openide.windows [6.5.31 200704122300]
-Need to get 0 B/1,495 kB of archives.
+	org.openide.text [6.9.32 200704122300]
-After this operation, 4,566 kB of additional disk space will be used.
+	org.openide.actions [6.5.31 200704122300]
-Do you want to continue? [Y/n] y
+	de.bruker.mri.thirdparty [1.0 100505]
-Selecting previously unselected package libomnithread3c2.
+	de.bruker.mri.lib [1.0 100505]
-(Reading database ... 160073 files and directories currently installed.)
+	de.bruker.mri.serviceprovider [1.0 100505]
-Preparing to unpack .../libomnithread3c2_4.1.6-2_i386.deb ...
+	org.netbeans.api.progress/1 [1.5.31 200704122300]
-Unpacking libomnithread3c2 (4.1.6-2) ...
+	de.bruker.mri.util [1.0 100505]
-Selecting previously unselected package libomniorb4-1.
+	de.bruker.mri.diagrams [1.0 100505]
-Preparing to unpack .../libomniorb4-1_4.1.6-2_i386.deb ...
+	jmf [1.0 100505]
-Unpacking libomniorb4-1 (4.1.6-2) ...
+	de.bruker.mri.infra [1.0 100505]
-Setting up libomnithread3c2 (4.1.6-2) ...
+	de.bruker.mri.viewer [1.0 100505]
-Setting up libomniorb4-1 (4.1.6-2) ...
+	de.bruker.mri.compat [1.0 100505]
-Processing triggers for libc-bin (2.19-18+deb8u10) ...
+	de.bruker.mri.cpr [1.0 100505]
+	de.bruker.mri.viewer2d [1.0 100505]
-root@sermn115:/opt/PV5.1/prog/bin# ln -s /usr/lib/libomniORB4.so.1.6 /usr/lib/libomniORB4.so.0
+	de.bruker.mri.recoviewer2d [1.0 100505]
-root@sermn115:/opt/PV5.1/prog/bin# ls -l /usr/lib/libomniORB4*
+	org.openide.loaders [5.9.31 200704122300]
-lrwxrwxrwx 1 root root      27 Aug  4 16:42 /usr/lib/libomniORB4.so.0 -> /usr/lib/libomniORB4.so.1.6
+	org.netbeans.bootstrap/1 [2.3.31 200704122300]
-lrwxrwxrwx 1 root root      18 Mar  6  2012 /usr/lib/libomniORB4.so.1 -> libomniORB4.so.1.6
+	org.netbeans.core.startup/1 [1.5.31 200704122300]
--rw-r--r-- 1 root root 1609476 Mar  6  2012 /usr/lib/libomniORB4.so.1.6
+	org.netbeans.swing.plaf [1.5.31 200704122300]
+	org.netbeans.core/2 [3.2.31.1 200704122300]
-root@sermn115:/opt/PV5.1/prog/bin# ln -s /usr/lib/libomniDynamic4.so.1.6 /usr/lib/libomniDynamic4.so.0
+	org.netbeans.modules.settings/1 [1.10.51 200704122300]
-root@sermn115:/opt/PV5.1/prog/bin# ls -l /usr/lib/libomniDynamic4.so*
+	de.bruker.mri.pipeadm [1.0 100505]
-lrwxrwxrwx 1 root root      31 Aug  4 16:43 /usr/lib/libomniDynamic4.so.0 -> /usr/lib/libomniDynamic4.so.1.6
+	de.bruker.mri.exportservices [1.0 100505]
-lrwxrwxrwx 1 root root      22 Mar  6  2012 /usr/lib/libomniDynamic4.so.1 -> libomniDynamic4.so.1.6
+	org.netbeans.swing.tabcontrol [1.6.31 200704122300]
--rw-r--r-- 1 root root 2372640 Mar  6  2012 /usr/lib/libomniDynamic4.so.1.6
+	de.bruker.mri.viewer1d [1.0 100505]
+	de.bruker.mri.acqviewer1d [1.0 100505]
-root@sermn115:/home/sermnadmin# ln -s /lib/i386-linux-gnu/libpcre.so.3.13.1 /lib/i386-linux-gnu/libpcre.so.0
+	org.netbeans.core.windows/2 [2.7.31.1 200704122300]
-root@sermn115:/home/sermnadmin# ls -l /lib/i386-linux-gnu/libpcre.so*lrwxrwxrwx 1 root root     37 Aug  4 16:59 /lib/i386-linux-gnu/libpcre.so.0 -> /lib/i386-linux-gnu/libpcre.so.3.13.1
+	org.netbeans.libs.formlayout/1 [1.2.31 1 200704122300]
-lrwxrwxrwx 1 root root     17 Mar 26  2016 /lib/i386-linux-gnu/libpcre.so.3 -> libpcre.so.3.13.1
+	de.bruker.mri.vip [ 100505]
--rw-r--r-- 1 root root 464180 Mar 26  2016 /lib/i386-linux-gnu/libpcre.so.3.13.1
+	de.bruker.mri.jni [1.0 100505]
+	org.netbeans.modules.options.api/0 [1.3.31 200704122300]
-nmrsu@sermn115:/opt/PV5.1$ ldd ./prog/bin/pvcmd
+	de.bruker.mri.recoviewer1d [1.0 100505]
-	linux-gate.so.1 (0xf773a000)
+	de.bruker.mri.jive [1.0 100505]
-	libomniORB4.so.0 => /usr/lib/libomniORB4.so.0 (0xf758e000)
+	org.netbeans.core.ui/1 [1.9.31 200704122300]
-	libomniDynamic4.so.0 => /usr/lib/libomniDynamic4.so.0 (0xf734a000)
+/opt/PV5.1/prog/pvmacros/PvStartup: 115: [: 1003: unexpected operator
-	libomnithread.so.3 => /usr/lib/libomnithread.so.3 (0xf7343000)
+PVSTARTUP validation in pvScan : Your FLEXlm license for PVSTARTUP version 5.000 is valid until 5-mar-2034
-	libpthread.so.0 => /lib/i386-linux-gnu/i686/cmov/libpthread.so.0 (0xf7327000)
-	libpcre.so.0 => /lib/i386-linux-gnu/libpcre.so.0 (0xf72b4000)
-	libdl.so.2 => /lib/i386-linux-gnu/i686/cmov/libdl.so.2 (0xf72af000)
-	librt.so.1 => /lib/i386-linux-gnu/i686/cmov/librt.so.1 (0xf72a6000)
-	libstdc++.so.6 => /usr/lib/i386-linux-gnu/libstdc++.so.6 (0xf71b3000)
-	libm.so.6 => /lib/i386-linux-gnu/i686/cmov/libm.so.6 (0xf716d000)
-	libgcc_s.so.1 => /lib/i386-linux-gnu/libgcc_s.so.1 (0xf7150000)
-	libc.so.6 => /lib/i386-linux-gnu/i686/cmov/libc.so.6 (0xf6fa3000)
-	/lib/ld-linux.so.2 (0x56646000)
 </file>
-Ara que s'han instal·lat les biblioteques que necessita el programa, faig un nou intent d'executar el ParaVision, però dóna un nou error,
+i el programa s'obre sense cap missatge d'error i només amb dos missatges d'avís: un per informar que la versió de GNU/Linux no és l'esperada (és més nova, mooolt més nova), i un altre per avisar de que no troba les darreres dades per mostrar-les en pantalla.
-<file>
+{{ :informatica:paravision:20170807-1429-paravision-51-first-time-on-debian.png | Executant ParaVision 5.1 per primer cop a Debian 8.9 "Jessie"}}
-sermnadmin@sermn115:/opt/PV5.1$ ./pv
-/opt/PV5.1/prog/bin/scripts/../topspin: 1: /opt/PV5.1/prog/bin/scripts/../topspin: /opt/PV5.1/pathScript: not found
-/opt/PV5.1/prog/bin/scripts/../topspin: 1: /opt/PV5.1/prog/bin/scripts/../topspin: /opt/PV5.1/pathScript: not found
-/opt/PV5.1/prog/bin/pvcmd: symbol lookup error: /opt/PV5.1/prog/bin/pvcmd: undefined symbol: _ZN4omni11omniORB_4_0E
-*****
+Com es pot veure a la captura de pantalla, es mostra la finestra de configuració de l'espectròmetre //Configuration check// i caldrà executar les comandes ''Cf'' i ''Expinstall'' per configurar l'espectròmetre (en aquest cas, una datastation).
-ERROR   (Sun Aug  6 17:17:18 2017)
-*****
-Cannot access the CORBA Name Service though it is running. You may restart
-the CORBA Name Service by entering the command (as user root)
-/etc/init.d/corbaNameService.default restart
+===== Configuració del sistema amb 'cf' =====
-</file>
-Comprovo amb ''ldd -d'' (-d, --data-relocs   process data relocations) quin és el problema,
+<WRAP help>
+Abans de configurar el sistema consultar la següent documentació:
-<file>
+**ParaVision Configuration after Installation.**\\ ParaVision 5.1 Manual. Chapter 1.\\  (Documentació en PDF del programa al fitxer ///opt/PV5.1/prog/docu/english/pvman/E/Docs/E01_ConfigurationStart.pdf//)
-sermnadmin@sermn115:/opt/PV5.1/prog/bin$ ldd -d ./pvcmd
-	linux-gate.so.1 (0xf770b000)
-	libomniORB4.so.0 => /usr/lib/libomniORB4.so.0 (0xf755f000)
-	...
-	/lib/ld-linux.so.2 (0x565a9000)
-undefined symbol: _ZN4omni11omniORB_4_0E	(./pvcmd)
-undefined symbol: _ZTIN14PortableServer19RefCountServantBaseE	(./pvcmd)
-</file>
-i veig que hi ha dos símbols a l'executable ''pvcmd'' que no es troben en cap de les biblioteques dinàmiques enllaçades. Examino les biblioteques, i trobo que el símbol està disponible a ''libomniORB4.so.0'',
+**System Configuration. Configuration for a Datastation.**\\
+ParaVision® 4.0. Advanced Users Manual. Part 1. Chapter 2.  Page D-2-66.\\
+(Documentació impresa)
+</WRAP>
-<file>
+Premo el botó <key>cf</key> a la pantalla inicial i edito la selecció de la configuració activa //Datastation//:
-$ readelf --symbols /usr/lib/libomniORB4.so.0 | grep ZN4omni11omniORB
+  * Configuration:  Datastation
-: 001879c8     4 OBJECT  GLOBAL DEFAULT   26 _ZN4omni11omniORB_4_1E
+  * Spectrometer type:  Avance-AV 300
-</file>
+  * Frequency [MHz]:  300.13
+  * Type:  Datastation
-però amb un número de versió superior: **4_1E** en comptes de **4_0E**. Com que un canvi de versió vol dir que es perd la compatibilitat cap enrere, hauré de localitzar la versió de la biblioteca amb el símbol correcte, i instal·lar-la.
+A les finestes següents accepto els paràmetres de configuració que es mostren per defecte, i premo el botó <key>Next > </key> per passar a la següent finestra. Tot i que no és necessari, a les finestres //Edit nuclei table// i //Edit Spectrometer Parameter//, premo el botó <key>Save</key> per guardar la configuració abans de passar a la finestra següent. Finalment m'aturo quan arribo a la finestra //Additional configuration programs//.
-==== Downgrading libomniORB4 ====
+La configuració final de la Datastation es pot consultar al fitxer //uxnmr.info//
-Em descarrego els paquets //libomniORB4*// de les versions anteriors fins trobar el que conté la biblioteca ''libomniORB4.so.0'': //libomniorb4c2_4.0.6-2.1_i386.deb// de la versió Debian 4.0 (Etch) de setembre de 2007.
-Per instal·lar aquest paquet i les seves dependències, segueixo les instruccions i recomanacions que trobo als enllaços:
-  * [[https://www.debian.org/distrib/archive | Distribution Archives - Debian archive]]
-  * [[https://unix.stackexchange.com/questions/60555/debian-is-it-possible-safe-to-install-packages-from-an-older-version-of-the-rep | Debian: Is it possible/safe to install packages from an older version of the repository?]]
-  * [[https://askubuntu.com/questions/138284/how-to-downgrade-a-package-via-apt-get | How to downgrade a package via apt-get?]]
-Començo per crear un fitxer amb la configuració per accedir al dipòsit de paquets de Debian Archive,
 <file>
-root@sermn115:/etc/apt/sources.list.d# cat 6-etch.list
+nmrsu@sermn115:/opt/PV5.1/conf/instr/Datastation$ more uxnmr.info
-# DEBIAN ETCH FROM DEBIAN ARCHIVE
+CONFIGURATION INFORMATION
+=========================
-deb http://archive.debian.org/debian/ etch contrib main non-free
+Date         : Mon Aug  7 15:47:10 2017
+Release      : TopSpin Acquisition Version ts_2_0:pl-5
+Host         : sermn115 Linux 4.6.0-0.bpo.1-amd64 #1 SMP Debian 4.6.4-1~bpo8+1 (2016-08-11) x86_64
+User         : nmrsu (Bruker TopSpin/ParaVision Superuser,,,)
+System       : Datastation configured as Avance-AV NMR spectrometer
+               (no acquisition hardware available)
+H-frequency : 300.13 MHz
 </file>
-i tot seguit executo la comanda ''apt-get update'' per afegir els paquets de la versió //Etch// a la llista de paquets disponibles, finalment instal·lo el paquet de la versió antiga,
+===== Installation of standard experiments (expinstall) =====
-<file>
-root@sermn115:/etc/apt/sources.list.d# apt-get -t etch install libomniORB4:i386
-Reading package lists... Done
-Building dependency tree
-Reading state information... Done
-Note, selecting 'libomniorb4c2:i386' instead of 'libomniorb4:i386'
-The following extra packages will be installed:
-  libssl0.9.8:i386
-The following NEW packages will be installed:
-  libomniorb4c2:i386 libssl0.9.8:i386
-upgraded, 2 newly installed, 0 to remove and 0 not upgraded.
-Need to get 3,864 kB of archives.
-After this operation, 10.2 MB of additional disk space will be used.
-Do you want to continue? [Y/n] n
-Abort.
-root@sermn115:/etc/apt/sources.list.d# apt-get -t etch install libomniORB4:i386
-Reading package lists... Done
-Building dependency tree
-Reading state information... Done
-Note, selecting 'libomniorb4c2:i386' instead of 'libomniorb4:i386'
-The following extra packages will be installed:
-  libssl0.9.8:i386
-The following NEW packages will be installed:
-  libomniorb4c2:i386 libssl0.9.8:i386
-upgraded, 2 newly installed, 0 to remove and 0 not upgraded.
-Need to get 3,864 kB of archives.
-After this operation, 10.2 MB of additional disk space will be used.
-Do you want to continue? [Y/n]
-WARNING: The following packages cannot be authenticated!
-  libssl0.9.8:i386 libomniorb4c2:i386
-Install these packages without verification? [y/N] y
-Get:1 http://archive.debian.org/debian/ etch/main libssl0.9.8 i386 0.9.8c-4etch9 [2,722 kB]
-Get:2 http://archive.debian.org/debian/ etch/main libomniorb4c2 i386 4.0.6-2.1 [1,142 kB]
-Fetched 3,864 kB in 1s (2,825 kB/s)
-Preconfiguring packages ...
-Selecting previously unselected package libssl0.9.8.
-(Reading database ... 160171 files and directories currently installed.)
-Preparing to unpack .../libssl0.9.8_0.9.8c-4etch9_i386.deb ...
-Unpacking libssl0.9.8 (0.9.8c-4etch9) ...
-Selecting previously unselected package libomniorb4c2.
-Preparing to unpack .../libomniorb4c2_4.0.6-2.1_i386.deb ...
-Unpacking libomniorb4c2 (4.0.6-2.1) ...
-Setting up libssl0.9.8 (0.9.8c-4etch9) ...
-Setting up libomniorb4c2 (4.0.6-2.1) ...
-Processing triggers for libc-bin (2.19-18+deb8u10) ...
-</file>
-Comprovo que efectivament s'hagi instal·lat la biblioteca que necessita el programa ''pvcmd'',
-<file>
-root@sermn115:/usr/lib# ls -l libomniORB*
-lrwxrwxrwx 1 root root      18 Aug 28  2006 libomniORB4.so.0 -> libomniORB4.so.0.6
--rw-r--r-- 1 root root 1436828 Aug 28  2006 libomniORB4.so.0.6
-</file>
-i que contingui la versió correcta **4_0E** del símbol ''ZN4omni11omniORB'',
-<file>
-# readelf --symbols /usr/lib/libomniORB4.so.0 | grep ZN4omni11omniORB
-: 0015e90c     4 OBJECT  GLOBAL DEFAULT   23 _ZN4omni11omniORB_4_0E
-</file>
-===== Instal·lació de biblioteques addicionals - 2a part =====
-Ara que s'ha resolt aquesta dependència del programa ''pvcmd'', provo a executar el ParaVision, però quan comprova les dependències dels programes de TopSpin/ParaVision, encara troba a faltar unes quantes biblioteques (veure apartat SUMMARY OF UNSATISFIED LIBRARIES) i alguns programes (veure apartat SUMMARY OF UNSATISFIED SOFTWARE),
-<file>
-sermnadmin@sermn115:/opt/PV5.1$ ./pv
-/opt/PV5.1/prog/bin/scripts/../topspin: 1: /opt/PV5.1/prog/bin/scripts/../topspin: /opt/PV5.1/pathScript: not found
-/opt/PV5.1/prog/bin/scripts/../topspin: 1: /opt/PV5.1/prog/bin/scripts/../topspin: /opt/PV5.1/pathScript: not found
-Checking dependencies (only once), please be patient ... :
-GetOpenLibraryDependencies() : Checking in /opt/PV5.1/prog/mod ...
-/opt/PV5.1/topspin: 1: /opt/PV5.1/topspin: /opt/PV5.1/pathScript: not found
-...
-/opt/PV5.1/topspin: 1: /opt/PV5.1/topspin: /opt/PV5.1/pathScript: not found
-GetOpenLibraryDependencies() : Checking in /opt/PV5.1/prog/bin ...
-/opt/PV5.1/topspin: 1: /opt/PV5.1/topspin: /opt/PV5.1/pathScript: not found
-...
-/opt/PV5.1/topspin: 1: /opt/PV5.1/topspin: /opt/PV5.1/pathScript: not found
-GetOpenPackageDependencies() :
-Searching for program convert ...
-Searching for file pattern /usr/include/*/pcre.h ...
-Searching for program latex ...
-ParaVision cannot be started due to the following unsatisfied dependencies :
-SUMMARY OF UNSATISFIED LIBRARIES :
-Module /opt/PV5.1/prog/mod/dirdata says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/shimTool says : missing 	libXt.so.6 => not found
-Module /opt/PV5.1/prog/bin/checkOpenGLVersions says : missing 	libGL.so.1 => not found
-Module /opt/PV5.1/prog/bin/methcomp says : missing 	par.so => not found
-Module /opt/PV5.1/prog/mod/cprserver says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/mvplane says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/crponoff says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/cf says : missing 	libcb.so => not found
-Module /opt/PV5.1/prog/mod/pipe says : missing 	par.so => not found
-Module /opt/PV5.1/prog/bin/xfontpath says : missing 	libXt.so.6 => not found
-Module /opt/PV5.1/prog/mod/vconv says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/bin/calcShims says : missing 	libg2c.so.0 => not found
-Module /opt/PV5.1/prog/mod/goutil says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/testRfGradSv says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/bayes says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/bin/convParxPars says : missing 	par.so => not found
-Module /opt/PV5.1/prog/mod/edteserver says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/edtgserver says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/acq_tail says : missing 	par.so => not found
-Module /opt/PV5.1/prog/mod/t1 says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/bsmseth says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/atmaserver says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/disknew says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/proc1d says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/bin/bsmsclient says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/mvrow says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/remotePipeSupplier says : missing 	par.so => not found
-Module /opt/PV5.1/prog/mod/jcamp says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/bin/sendgui says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/maxent says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/vtu says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/acq_control says : missing 	libap.so => not found
-Module /opt/PV5.1/prog/mod/psf says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/nmrquant says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/decon says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/bin/nmrsim says : missing 	libXt.so.6 => not found
-Module /opt/PV5.1/prog/mod/reco says : missing 	par.so => not found
-Module /opt/PV5.1/prog/mod/jconv says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/acq_auto says : missing 	par.so => not found
-Module /opt/PV5.1/prog/mod/sipar says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/bsmsproxyserver says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/jcamp5 says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/bin/parxserver says : missing 	par.so => not found
-Module /opt/PV5.1/prog/mod/rfDisplay says : missing 	libXt.so.6 => not found
-Module /opt/PV5.1/prog/mod/aqrackserver says : missing 	libxerces-c.so.27 => not found
-Module /opt/PV5.1/prog/mod/topshim says : missing 	libxerces-c.so.27 => not found
-Module /opt/PV5.1/prog/mod/apkm says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/bin/printconf says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/go4 says : missing 	libap.so => not found
-Module /opt/PV5.1/prog/mod/recin says : missing 	par.so => not found
-Module /opt/PV5.1/prog/mod/pvDatMan says : missing 	libXt.so.6 => not found
-Module /opt/PV5.1/prog/mod/proc2d says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/edacbserver says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/ftnd says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/simacq says : missing 	par.so => not found
-Module /opt/PV5.1/prog/mod/getprosol says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/bin/epiNavCor says : missing 	par.so => not found
-Module /opt/PV5.1/prog/mod/getlim says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/pvScan says : missing 	libXt.so.6 => not found
-Module /opt/PV5.1/prog/mod/inchi says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/cpr says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/upnpctrlserver says : missing 	libxerces-c.so.27 => not found
-Module /opt/PV5.1/prog/mod/qtpserver says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/remdiag says : missing 	par.so => not found
-Module /opt/PV5.1/prog/mod/xwinshape says : missing 	par.so => not found
-Module /opt/PV5.1/prog/mod/setpreserver says : missing 	libxerces-c.so.27 => not found
-Module /opt/PV5.1/prog/bin/pvArchive says : missing 	par.so => not found
-Module /opt/PV5.1/prog/mod/edparproc says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/jstart says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/bin/rrstest says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/go says : missing 	libap.so => not found
-Module /opt/PV5.1/prog/bin/NmrCalc says : missing 	libNmrCalc.so => not found
-Module /opt/PV5.1/prog/mod/dirlist says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/hpcu says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/parx says : missing 	libpreamp.so => not found
-Module /opt/PV5.1/prog/mod/bsmsserver says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/mvcube says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/hconfserver says : missing 	libxerces-c.so.27 => not found
-Module /opt/PV5.1/prog/bin/bisdriver says : missing 	libxerces-c.so.27 => not found
-Module /opt/PV5.1/prog/mod/audit says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/bin/convRouting says : missing 	par.so => not found
-Module /opt/PV5.1/prog/mod/recout says : missing 	libCoreWrap.so => not found
-Module /opt/PV5.1/prog/mod/siparproc says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/cprclient says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/recoStage says : missing 	libg2c.so.0 => not found
-Module /opt/PV5.1/prog/bin/autoplot says : missing 	libxerces-c.so.27 => not found
-Module /opt/PV5.1/prog/mod/lockserver says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/bin/pvDatManDaemon says : missing 	par.so => not found
-Module /opt/PV5.1/prog/mod/bsms says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/xtip says : missing 	libg2c.so.0 => not found
-Module /opt/PV5.1/prog/mod/peak says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/xcortab says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/proc3d says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/bin/rtClientB0 says : missing 	par.so => not found
-Module /opt/PV5.1/prog/mod/dataserver says : missing 	libap.so => not found
-Module /opt/PV5.1/prog/bin/pvDcmExport says : missing 	libofstd.so => not found
-Module /opt/PV5.1/prog/bin/dutycycle says : missing 	par.so => not found
-Module /opt/PV5.1/prog/mod/pvCam says : missing 	libXt.so.6 => not found
-Module /opt/PV5.1/prog/bin/freco says : missing 	par.so => not found
-Module /opt/PV5.1/prog/mod/dppinit says : missing 	libcb.so => not found
-Module /opt/PV5.1/prog/mod/sref says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/pvCmd says : missing 	libXt.so.6 => not found
-Module /opt/PV5.1/prog/mod/lispar says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/bin/xpdf says : missing 	libXpm.so.4 => not found
-Module /opt/PV5.1/prog/bin/killtopspin says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/linteg says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/ConvFieldMaps says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/xhelp says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/bin/pvsysman says : missing 	libxerces-c.so.27 => not found
-Module /opt/PV5.1/prog/bin/pvTransfer says : missing 	libftp.so.3 => not found
-Module /opt/PV5.1/prog/mod/xwish3 says : missing 	libXt.so.6 => not found
-Module /opt/PV5.1/prog/mod/mas says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/bin/calibShims says : missing 	libg2c.so.0 => not found
-Module /opt/PV5.1/prog/mod/confamp says : missing 	libxerces-c.so.27 => not found
-Module /opt/PV5.1/prog/mod/masserver says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/bin/xwinplot says : missing 	libxerces-c.so.27 => not found
-Module /opt/PV5.1/prog/mod/acq_out says : missing 	par.so => not found
-Module /opt/PV5.1/prog/mod/daisy says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/go3 says : missing 	libPath.so => not found
-Module /opt/PV5.1/prog/mod/edtg says : missing 	libPath.so => not found
-SUMMARY OF UNSATISFIED SOFTWARE :
-Missing PATTERN:/usr/include/*/pcre.h. Please install package pcre-devel.
-Missing PROG:latex. Please install package tetex/latex.
-++++
-INFO    (Sun Aug  6 19:18:31 2017)
-++++
-You may skip this test by starting ParaVision with './pv -n'
-</file>
-==== Programes no trobats ====
-Per resoldre el problema amb els programes no trobats instal·lo els paquets
-  * libpcre3-dev:i386, que instal·la libpcrecpp0:i386; i
-  * texlive en comptes de tetex/latex
-==== Biblioteques no trobades ====
-De les biblioteques que no es troben, algunes hi són a la carpeta ///opt/PV5.1/prog/shlib//
-  * libPath.so
-  * par.so
-  * libcb.so
-  * libap.so
-  * libxerces-c.so.27
-  * libpreamp.so
-i d'altres a la carpeta  ///opt/PV5.1/prog/pvshlib//
+El pas següent és executar la comanda ''expinstall'' per instal·lar els experiments estàndard i adaptar-los a la freqüència de l'espectròmetre/datastation configurat.
-  * libNmrCalc.so
-  * libCoreWrap.so
-i segurament el programa no les troba per un problema amb la definició de LD_LIBRARY_PATH.
+===== ParaVision configuration setup (pvedconf) =====
-Algunes biblioteques no hi són al sistema i caldrà instal·lar la seva versió de 32-bits:
+Executo la comanda ''pvedconf'' per configurar el ParaVision i assigno els següents valors:
-  * libXt.so.6 - instal·lar el paquet libxt6:i386 :ok:
+  * Institution name:  SeRMN, Univ. Autonoma Barcelona
-    * ''# apt-get install -t jessie-backports libxt6:i386''
+  * Instrument/Station name:  sermn115
-  * libGL.so.1 - instal·lar els paquets libgl1-mesa-glx:i386 :ok: i libgl1-mesa-dri:i386 :ok:
+  * Shim status: noshim
-    * ''# apt-get install -t jessie-backports libgl1-mesa-glx:i386''
+  * User Type:  Routine
-    * Instal·la libgl1-mesa-dri:i386
+  * Disclaimer Language: Default
-    * Instal·la un munt de dependències, totes biblioteques, i actualitza alguns paquets.
-  * libXpm.so.4 - instal·lar el paquet libxpm4:i386 :ok:
-    * ''# apt-get install -t jessie-backports libxpm4:i386''
-  * libofstd.so - instal·lar el paquet libdcmtk2:i386 :ok:
-    * ''# apt-get install -t jessie-backports libdcmtk2:i386''
-    * Potser caldrà instal·lar també el paquet libdcmtk2-dev:i386
-Finalment, hi ha dues biblioteques que constitueixen un cas a part:
+Finalment, premo el botó <key>Finish</key> per tancar la finestra de configuració.
-  * libftp.so.3 -
-  * libg2c.so.0 -

SeRMN Wiki

User Tools

Site Tools

Differences

Page Tools