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Aquesta pàgina conté les tasques posteriors a la instal·lació de les dues versions 3.6.3 i 3.6.4 del Topspin. Per exemple: organitzar les carpetes creades, eliminar les carpetes redundants o innecessàries, organitzar les carpetes de dades, etc.
/opt/topsin3.6.3/conf/instr/topspin3.5pl6 i /opt/topsin3.6.3/conf/instr/topspin3.6.1 dins /opt/topspin3.6.4/conf/instr./opt/topsin3.6.3/ dins /opt/topspin3.6.4/conf/instr/opt/topspin3.6.4/conf/instr/ les carpetes i fitxers innecessaris de les instal·lacions anteriors, entre altres: examdata, guide, jython, prog/docu, etc.L'espai final ocupat pels fitxers de configuració de les anteriors instal·lacions és:
# du -hs topspin* 1.4G topspin3.5pl6 1015M topspin3.6.1 537M topspin3.6.3
Aquests són els discos durs HDD procedents d'altres ordinadors i instal·lats al nou ordinador.
amb la següent configuració de LVM,
# pvs /dev/sdc5
PV VG Fmt Attr PSize PFree
/dev/sdc5 cie-55-31-vg lvm2 a-- <465.52g 5.98g
# vgs cie-55-31-vg
VG #PV #LV #SN Attr VSize VFree
cie-55-31-vg 1 6 0 wz--n- <465.52g 5.98g
# lvs cie-55-31-vg
LV VG Attr LSize Pool Origin Data% Meta% Move Log Cpy%Sync Convert
home cie-55-31-vg -wi-ao---- 400.00g
opt cie-55-31-vg -wi-ao---- 40.00g
root cie-55-31-vg -wi-ao---- <8.38g
swap_1 cie-55-31-vg -wi-a----- <8.00g
tmp cie-55-31-vg -wi-a----- 380.00m
var cie-55-31-vg -wi-ao---- 2.79g
SMART indica que aquest disc ha estat en funcionament 4 anys i 3 mesos, però que no té cap problema. En qualsevol cas, aquest disc dur no es farà servir al nou ordinador, i caldrà transferir el seu contingut al nou disc dur HDD.
SMART indica que aquest disc ha estat en funcionament 1 anys i 11 mesos, però que no té cap problema.
Després de comprovar que les dades de RMN ja es van transferir al servidor de dades, i de transferir algunes carpetes que podrien tenir un interès històric, esborro les particions al disc. Llavors creo dues particions de 500 GB cadascuna sense sistema de fitxers i començo a configurar-les per LVM,
# pvcreate /dev/sdb1 /dev/sdb2 Physical volume "/dev/sdb1" successfully created. Physical volume "/dev/sdb2" successfully created. # pvs /dev/sdb[1-9] PV VG Fmt Attr PSize PFree /dev/sdb1 cie-54-214-vg-2 lvm2 a-- 465.66g 465.66g /dev/sdb2 cie-54-214-vg-2 lvm2 a-- <465.85g <465.85g # vgcreate cie-54-214-vg-2 /dev/sdb1 /dev/sdb2 Volume group "cie-54-214-vg-2" successfully created # vgs VG #PV #LV #SN Attr VSize VFree centos_cie-54-214 1 3 0 wz--n- <464.76g 4.00m cie-54-214-vg-2 2 0 0 wz--n- <931.51g <931.51g cie-55-31-vg 1 6 0 wz--n- <465.52g 5.98g # lvcreate -L 200G -n current-data cie-54-214-vg-2 Logical volume "current-data" created. # lvcreate -l 100%FREE -n archived-data cie-54-214-vg-2 Logical volume "archived-data" created. # lvs cie-54-214-vg-2 LV VG Attr LSize Pool Origin Data% Meta% Move Log Cpy%Sync Convert archived-data cie-54-214-vg-2 -wi-a----- <731.51g current-data cie-54-214-vg-2 -wi-a----- 200.00g # lvdisplay cie-54-214-vg-2 --- Logical volume --- LV Path /dev/cie-54-214-vg-2/current-data LV Name current-data VG Name cie-54-214-vg-2 LV UUID k1VFfK-fOhn-WPUS-ojPF-d89U-rzoj-MY1eWs LV Write Access read/write LV Creation host, time cie-54-214.uab.cat, 2021-08-31 17:29:34 +0200 LV Status available # open 0 LV Size 200.00 GiB Current LE 51200 Segments 1 Allocation inherit Read ahead sectors auto - currently set to 256 Block device 253:9 --- Logical volume --- LV Path /dev/cie-54-214-vg-2/archived-data LV Name archived-data VG Name cie-54-214-vg-2 LV UUID RTFalo-DXwm-xCNZ-5ELs-u8LM-4b8e-ahjZ4f LV Write Access read/write LV Creation host, time cie-54-214.uab.cat, 2021-08-31 17:30:42 +0200 LV Status available # open 0 LV Size <731.51 GiB Current LE 187266 Segments 2 Allocation inherit Read ahead sectors auto - currently set to 256 Block device 253:10
i finalment creo el sistema de fitxers (ext4) a cadascun dels volums lògics,
# mkfs.ext4 /dev/mapper/cie--54--214--vg--2-current--data mke2fs 1.42.9 (28-Dec-2013) Filesystem label= OS type: Linux Block size=4096 (log=2) Fragment size=4096 (log=2) Stride=0 blocks, Stripe width=0 blocks 13107200 inodes, 52428800 blocks 2621440 blocks (5.00%) reserved for the super user First data block=0 Maximum filesystem blocks=2199912448 1600 block groups 32768 blocks per group, 32768 fragments per group 8192 inodes per group Superblock backups stored on blocks: 32768, 98304, 163840, 229376, 294912, 819200, 884736, 1605632, 2654208, 4096000, 7962624, 11239424, 20480000, 23887872 Allocating group tables: done Writing inode tables: done Creating journal (32768 blocks): done Writing superblocks and filesystem accounting information: done # mkfs.ext4 /dev/mapper/cie--54--214--vg--2-archived--data mke2fs 1.42.9 (28-Dec-2013) Filesystem label= OS type: Linux Block size=4096 (log=2) Fragment size=4096 (log=2) Stride=0 blocks, Stripe width=0 blocks 47947776 inodes, 191760384 blocks 9588019 blocks (5.00%) reserved for the super user First data block=0 Maximum filesystem blocks=2340421632 5853 block groups 32768 blocks per group, 32768 fragments per group 8192 inodes per group Superblock backups stored on blocks: 32768, 98304, 163840, 229376, 294912, 819200, 884736, 1605632, 2654208, 4096000, 7962624, 11239424, 20480000, 23887872, 71663616, 78675968, 102400000 Allocating group tables: done Writing inode tables: done Creating journal (32768 blocks): done Writing superblocks and filesystem accounting information: done
Creo les carpetes on es muntaran els nous sistemes de fitxers,
# mkdir -p nmrdata/current # mkdir -p nmrdata/archive # ls -l ../nmrdata/ total 8 drwxr-xr-x. 3 root root 4096 Aug 31 17:43 archive drwxr-xr-x. 3 root root 4096 Aug 31 17:43 current
Afegeixo les següents línies al fitxer /etc/fstab per muntar els nous sistemes de fitxers,
## 20210831 - MCE - Espai de disc per dades actuals i antigues ## /dev/mapper/cie--54--214--vg--2-current--data /opt/nmrdata/current ext4 defaults 0 0 /dev/mapper/cie--54--214--vg--2-archived--data /opt/nmrdata/archive ext4 defaults 0 0
i els munto
# mount -v /dev/mapper/cie--54--214--vg--2-current--data mount: /opt/nmrdata/current does not contain SELinux labels. You just mounted an file system that supports labels which does not contain labels, onto an SELinux box. It is likely that confined applications will generate AVC messages and not be allowed access to this file system. For more details see restorecon(8) and mount(8). mount: /dev/mapper/cie--54--214--vg--2-current--data mounted on /opt/nmrdata/current. # mount -v /dev/mapper/cie--54--214--vg--2-archived--data mount: /opt/nmrdata/archive does not contain SELinux labels. You just mounted an file system that supports labels which does not contain labels, onto an SELinux box. It is likely that confined applications will generate AVC messages and not be allowed access to this file system. For more details see restorecon(8) and mount(8). mount: /dev/mapper/cie--54--214--vg--2-archived--data mounted on /opt/nmrdata/archive.
Resoldre el problema amb el SELinux
archive segons la seva data. D'entrada, per anys, i més endavant per any i mes.Copio les dades de l'antic disc dur al nou disc dur,
# rsync -Hvax --progress --stats /mnt/old-400sb-home/sermnuab/data/* /opt/nmrdata/archive/ sending incremental file list aaraujo/ aaraujo/nmr/ afinitica/ afinitica/nmr/ afinitica/nmr/AF-79-Saccharin_ACN/ afinitica/nmr/AF-79-Saccharin_ACN/1/ afinitica/nmr/AF-79-Saccharin_ACN/1/acqu 8,834 100% 0.00kB/s 0:00:00 (xfr#1, ir-chk=1017/1387) afinitica/nmr/AF-79-Saccharin_ACN/1/acqus 9,006 100% 8.59MB/s 0:00:00 (xfr#2, ir-chk=1016/1387) afinitica/nmr/AF-79-Saccharin_ACN/1/audita.txt 701 100% 62.23kB/s 0:00:00 (xfr#3, ir-chk=1015/1387) afinitica/nmr/AF-79-Saccharin_ACN/1/fid : : test/nmr/tune-31P/1/pdata/1/thumb.png 1,667 100% 3.73kB/s 0:00:00 (xfr#1159681, to-chk=2/1385013) test/nmr/tune-31P/1/pdata/1/title 13 100% 0.03kB/s 0:00:00 (xfr#1159682, to-chk=1/1385013) venvirotech/ venvirotech/nmr/ Number of files: 1,385,013 (reg: 1,159,682, dir: 225,331) Number of created files: 1,385,013 (reg: 1,159,682, dir: 225,331) Number of deleted files: 0 Number of regular files transferred: 1,159,682 Total file size: 108,253,481,727 bytes Total transferred file size: 108,253,481,727 bytes Literal data: 108,253,481,727 bytes Matched data: 0 bytes File list size: 9,305,836 File list generation time: 0.001 seconds File list transfer time: 0.000 seconds Total bytes sent: 108,355,890,219 Total bytes received: 23,478,954 sent 108,355,890,219 bytes received 23,478,954 bytes 33,179,050.72 bytes/sec total size is 108,253,481,727 speedup is 1.00
Llavors moc les carpetes dels experiments de dins de les respectives carpetes nmr a la carpeta de cada grup, és a dir, de sermn/nmr a sermn,
# for DIR in * > do > mv $DIR/nmr/* $DIR > done mv: cannot stat ‘aaraujo/nmr/*’: No such file or directory mv: cannot stat ‘afinitica/nmr/*’: No such file or directory mv: cannot stat ‘catechol/nmr/*’: No such file or directory mv: cannot stat ‘esistare/nmr/*’: No such file or directory mv: cannot stat ‘guest/nmr/*’: No such file or directory mv: cannot stat ‘jaayllon/nmr/*’: No such file or directory mv: cannot stat ‘lost+found/nmr/*’: No such file or directory mv: cannot stat ‘nanomol/nmr/*’: No such file or directory mv: cannot stat ‘nmarco/nmr/*’: No such file or directory mv: cannot stat ‘venvirotech/nmr/*’: No such file or directory
Per acabar, comprovo que no queda res dins les carpetes nmr abans d'esborrar-les,
# find ./*/nmr -type f -print (finds nothing) # du -hs ./*/nmr 4.0K ./aaraujo/nmr 16K ./afinitica/nmr 4.0K ./afredi/nmr 4.0K ./aponrouch/nmr ... 4.0K ./sermn/nmr 4.0K ./teo/nmr 4.0K ./test/nmr 4.0K ./venvirotech/nmr # rm -ri ./*/nmr rm: remove directory ‘./aaraujo/nmr’? y rm: remove directory ‘./afinitica/nmr’? y rm: remove directory ‘./afredi/nmr’? y ... rm: remove directory ‘./sermn/nmr’? y rm: remove directory ‘./teo/nmr’? y rm: remove directory ‘./test/nmr’? y rm: remove directory ‘./venvirotech/nmr’? y
Creo a /opt/nmrdata/current les mateixes carpetes de dades que es varen crear als nous espectròmetres, per exemple, aquestes són les carpetes creades a l'Avance Neo 400 MHz
[sermnadmin@sermn017 nmrdata]$ ls -w 80
afinitica dmaspoch iratera lasem ralibes teo
aponrouch druizmolina jarbiol lost+found rokafuradada urquima
applus dytquimica jcasabo miquel rpleixats venvirotech
avallribera eva jcbayon miriam sedq vse
avirgili fteixidor jhernando naliaga sermn-data
cdomingo gtobias jpons nanomol sermn-test
cuantum iberhospitex jros pau synthesia
damabilino interquim jsuades pq-qorg teknokroma
[sermnadmin@sermn017 nmrdata]$ ls -1 -I lost+found > folder-names.txt
Transfereixo el fitxer al nou ordinador de l'Avance III 400 MHz i creo les carpetes de dades,
[root@cie-54-214 current] # for USER in `cat folder-names.txt` > do > mkdir --verbose $USER > done mkdir: created directory ‘afinitica’ mkdir: created directory ‘aponrouch’ mkdir: created directory ‘applus’ mkdir: created directory ‘avallribera’ [...] mkdir: created directory ‘urquima’ mkdir: created directory ‘venvirotech’ mkdir: created directory ‘vse’ # chown -R sermnuab:sermnuab [a-k,m-z]* lasem [root@cie-54-214 current]# ls -l total 192 drwxr-xr-x. 2 sermnuab sermnuab 4096 Sep 1 12:57 afinitica drwxr-xr-x. 2 sermnuab sermnuab 4096 Sep 1 12:57 aponrouch drwxr-xr-x. 2 sermnuab sermnuab 4096 Sep 1 12:57 applus drwxr-xr-x. 2 sermnuab sermnuab 4096 Sep 1 12:57 avallribera ... drwxr-xr-x. 2 sermnuab sermnuab 4096 Sep 1 12:57 jsuades drwxr-xr-x. 2 sermnuab sermnuab 4096 Sep 1 12:57 lasem drwx------. 2 root root 16384 Aug 31 17:43 lost+found drwxr-xr-x. 2 sermnuab sermnuab 4096 Sep 1 12:57 miquel ... drwxr-xr-x. 2 sermnuab sermnuab 4096 Sep 1 12:57 urquima drwxr-xr-x. 2 sermnuab sermnuab 4096 Sep 1 12:57 venvirotech drwxr-xr-x. 2 sermnuab sermnuab 4096 Sep 1 12:57 vse
Llavors, per cadascuna d'aquestes carpetes actives, moc les carpetes de dades més recents de archive a current. Ho faig a mà amb l'ajut del programa Mindight Commander després de definir unes dreceres de teclat per fer la tasca una mica menys feixuga.
current i archive.
Afegeixo les següents línies per compartir la carpeta de dades i la carpeta ~topspin/exp/stan/nmr/list amb el servidor de dades,
# SERMN - EXPORTED FOLDERS # Export NMR data folder to SeRMN data server # Because of SELinux, the data folder cannot be inside a home folder /opt/nmrdata sermn.uab.cat(ro,sync,no_subtree_check,root_squash,all_squash,insecure) # Export TopSpin 3.6.4 lists folder to SeRMN data server /opt/topspin3.6.4/exp/stan/nmr/lists sermn.uab.cat(ro,sync,no_subtree_check,root_squash,all_squash,insecure)
i exporto les carpetes
# exportfs -v -a
exporting sermn.uab.cat:/opt/topspin3.6.4/exp/stan/nmr/lists
exporting sermn.uab.cat:/opt/nmrdata
exporting spect:/usr/diskless/clients/spect
exporting spect:/usr/diskless/dl_usr
# exportfs -v
/usr/diskless/dl_usr
spect(sync,wdelay,hide,no_subtree_check,sec=sys,ro,secure,root_squash,no_all_squash)
/usr/diskless/clients/spect
spect(sync,wdelay,hide,no_subtree_check,sec=sys,rw,secure,no_root_squash,no_all_squash)
/opt/nmrdata sermn.uab.cat(sync,wdelay,hide,no_subtree_check,sec=sys,ro,insecure,root_squash,all_squash)
/opt/topspin3.6.4/exp/stan/nmr/lists
sermn.uab.cat(sync,wdelay,hide,no_subtree_check,sec=sys,ro,insecure,root_squash,all_squash)
Edito el fitxer /etc/fstab al servidor per actualitzar la informació sobre les carpetes exportades per l'espectròmetre,
root@sermnserver:/etc# cat fstab ... ################################################################################ # 2021-09-01 SPECTROMETER AVAILABLE AFTER COMPUTER UPGRADE # # AVANCE III 400SB + HR-MAS # Spectrometer or computer ... Bruker AVANCE III 400 MHz SB + HR-MAS # OS ......................... CentOS GNU/Linux # shared dir (protocol) ...... /opt/nmrdata (nfs) DATA DIRECTORY # # removed rsize/wsize option "rsize=8192,wsize=8192" so that the client uses the values set by the server ## TEMP OFF - 20210824 - MCE cie-55-31.uab.cat:/home/sermnuab/data /var/ftp/av3-400-sb nfs ro,nosuid,noexec,nodev,soft 0 0 ## TEMP OFF - 20210824 - MCE cie-55-31.uab.cat:/opt/topspin3.6.1/exp/stan/nmr/lists /var/ftp/av3-400-sb-ts3-lists nfs ro,nosuid,noexec,nodev,soft 0 0 cie-54-214.uab.cat:/opt/nmrdata /var/ftp/av3-400-sb nfs ro,nosuid,noexec,nodev,soft 0 0 cie-54-214.uab.cat:/opt/topspin3.6.4/exp/stan/nmr/lists /var/ftp/av3-400-sb-ts3-lists nfs ro,nosuid,noexec,nodev,soft 0 0 ...
Llavors provo a muntar la carpeta, però em dona un error
root@sermnserver:/etc# mount -v /var/ftp/av3-400-sb mount.nfs: timeout set for Sat Sep 4 12:18:17 2021 mount.nfs: trying text-based options 'soft,vers=4,addr=158.109.54.214,clientaddr=192.168.2.2' mount.nfs: mount(2): No route to host mount.nfs: trying text-based options 'soft,vers=4,addr=158.109.54.214,clientaddr=192.168.2.2' mount.nfs: mount(2): No route to host mount.nfs: trying text-based options 'soft,vers=4,addr=158.109.54.214,clientaddr=192.168.2.2' mount.nfs: mount(2): No route to host ^C
Comprovo si l'espectròmetre i el seu servidor de NFS són accessibles,
root@sermnserver:/etc# ping -c 5 cie-54-214.uab.cat
PING cie-54-214.uab.cat (158.109.54.214) 56(84) bytes of data.
64 bytes from cie-54-214.uab.es (158.109.54.214): icmp_seq=1 ttl=63 time=0.911 ms
64 bytes from cie-54-214.uab.es (158.109.54.214): icmp_seq=2 ttl=63 time=0.790 ms
64 bytes from cie-54-214.uab.es (158.109.54.214): icmp_seq=3 ttl=63 time=0.795 ms
64 bytes from cie-54-214.uab.es (158.109.54.214): icmp_seq=4 ttl=63 time=0.824 ms
64 bytes from cie-54-214.uab.es (158.109.54.214): icmp_seq=5 ttl=63 time=0.856 ms
--- cie-54-214.uab.cat ping statistics ---
5 packets transmitted, 5 received, 0% packet loss, time 4080ms
rtt min/avg/max/mdev = 0.790/0.835/0.911/0.048 ms
root@sermnserver:/etc# rpcinfo -p cie-54-214.uab.cat
rpcinfo: can't contact portmapper: RPC: Remote system error - No route to host
root@sermnserver:/etc# route -n
Kernel IP routing table
Destination Gateway Genmask Flags Metric Ref Use Iface
0.0.0.0 192.168.2.1 0.0.0.0 UG 0 0 0 eth0
0.0.0.0 192.168.2.1 0.0.0.0 UG 1024 0 0 eth1
192.168.2.0 0.0.0.0 255.255.255.0 U 0 0 0 eth0
192.168.2.0 0.0.0.0 255.255.255.0 U 0 0 0 eth1
root@sermnserver:/etc# traceroute cie-54-214.uab.cat
traceroute to cie-54-214.uab.cat (158.109.54.214), 30 hops max, 60 byte packets
1 sermn.sermn.net (192.168.2.1) 0.259 ms 0.291 ms 0.454 ms
2 cie-54-214.uab.es (158.109.54.214) 2.026 ms !X 2.059 ms !X 2.090 ms !X
i la resposta m'indica que hi ha comunicació entre els dos ordinadors, però que no es pot accedir al servei portmapper del servidor de NFS, potser perquè la configuració del firewall a l'espectròmetre ho impedeix. L'informe de la comanda traceroute indica el mateix, pot accedir a l'ordinador i pot mesurar el temps de resposta (per exemple, 2.026 ms), però no pot accedir als ports que fa servir per comprovar l'accés l'ordinador i per això surt !X a l'informe.
Comprovo la configuració del tallafocs a l'espectròmetre,
[root@cie-54-214 sermnadmin]# ip -brief addr lo UNKNOWN 127.0.0.1/8 ::1/128 ens3 UP 149.236.99.1/24 fe80::a236:9fff:fe8f:ab3/64 eno1 UP 158.109.54.214/20 fe80::5265:f3ff:fe3a:125e/64 [root@cie-54-214 sermnadmin]# firewall-cmd --get-active-zones public interfaces: eno1 trusted interfaces: ens3 [root@cie-54-214 sermnadmin]# firewall-cmd --list-services dhcpv6-client ssh
i afegeixo els serveis relacionats amb NFS que manquen,
[root@cie-54-214 sermnadmin]# firewall-cmd --permanent --zone=public --add-service=mountd success [root@cie-54-214 sermnadmin]# firewall-cmd --permanent --zone=public --add-service=nfs success [root@cie-54-214 sermnadmin]# firewall-cmd --permanent --zone=public --add-service=rpc-bind success [root@cie-54-214 sermnadmin]# firewall-cmd --reload success [root@cie-54-214 sermnadmin]# firewall-cmd --zone=public --list-services dhcpv6-client mountd nfs rpc-bind ssh
Torno a comprovar si el servidor de dades ja pot accedir al servidor NFS a l'espectròmetre,
root@sermnserver:/etc# rpcinfo -p cie-54-214.uab.cat
program vers proto port service
100000 4 tcp 111 portmapper
100000 3 tcp 111 portmapper
...
100003 2 tcp 2049 nfs
100003 3 tcp 2049 nfs
...
100021 4 tcp 46271 nlockmgr
100026 1 udp 766 bootparam
i com que ara té accés, provo a muntar la carpeta de dades i aquest cop funciona,
root@sermnserver:/etc# mount -v /var/ftp/av3-400-sb mount.nfs: timeout set for Sat Sep 4 19:17:13 2021 mount.nfs: trying text-based options 'soft,vers=4,addr=158.109.54.214,clientaddr=192.168.2.2' root@sermnserver:/etc# ls -l /var/ftp/av3-400-sb total 0 drwxr-xr-x 2 root root 6 Sep 1 12:07 archive drwxr-xr-x 2 root root 6 Sep 1 12:07 current
Copio el fitxer browsedir2_Local.prop de l'Avance Neo 400 MHz dins la carpeta /home/sermnuab/.topspin/prop i l'edito per canviar la ubicació de les carpetes de dades (/opt/nmrdata/current/) i eliminar els enllaços específics de l'altre espectròmetre. El resultat és,
$ cat browsedir2_Local.prop #/home/sermnuab/.topspin-cie-54-214/prop/browsedir2_Local.prop #Wed Sep 01 17:35:11 CEST 2021 29=/opt/nmrdata/current/druizmolina\=alias\=D Ruiz-Molina - ICN2 28=/opt/nmrdata/current/dmaspoch\=alias\=D Maspoch - ICN2 27=/opt/nmrdata/current/pq-qorg\=alias\=Prac Quim Org 26=/opt/nmrdata/current/jhernando\=alias\=J Hernando - UAB ... 32=/opt/nmrdata/current/sermn-data\=alias\=SeRMN - NMR Data 31=/opt/nmrdata/current/rpleixats\=alias\=R Pleixats - UAB 30=/opt/nmrdata/current/ralibes\=alias\=R Alibes - UAB
Copio el fitxer a /home/sermnadmin/.topspin/prop perquè tots dos comptes vegin les mateixes carpetes.
Sortosament, aquest error no sembla afectar al funcionament del TopSpin.
Error setting parameter "LIFTMODE": Parameter does not exist (Original message = Error setting parameter "LIFTMODE": Parameter does not exist) ==================================================== 2 September 2021 10:47:14.947 +0200 Topspin Version = TopSpin 3.6.4 (of 2021-07-26 14:56:34),build 95 OS Name = Linux 3.10.0-1160.25.1.el7.x86_64 JVM Version = 1.8.0_242 (64 bit) AdoptOpenJDK JVM Total memory = 170 MB JVM Free memory = 128 MB java.lang.Exception: Stack trace at bruker.bio.topspin.bfw.gui.warn.AbstractMessage.getDetailsString(AbstractMessage.java:875) at bruker.bio.topspin.bfw.gui.warn.AbstractMessage.setMsgSource(AbstractMessage.java:837) at bruker.bio.topspin.bfw.gui.warn.AbstractMessage.<init>(AbstractMessage.java:821) at de.bruker.nmr.mfw.base.BWarning.<init>(BWarning.java:59) at de.bruker.nmr.mfw.base.BError.<init>(BError.java:50) at de.bruker.nmr.sc.util.Misc.makeDialog(Misc.java:119) at de.bruker.nmr.sc.util.Misc.showMsg(Misc.java:98) at de.bruker.nmr.sc.util.Misc.showMsg(Misc.java:72) at de.bruker.nmr.sc.util.Misc.showMsg(Misc.java:59) at de.bruker.nmr.sc.bsms.impl.BsmsCorbaUtil$1.run(BsmsCorbaUtil.java:147) at java.lang.Thread.run(Thread.java:748)
Segons Bruker, aquest error es resol actualitzant el firmware de la placa ELCBñ. La versió actualment instal·lada és,
| Unit | Version | Date |
|---|---|---|
| ELCB Firmware | 150423 | Apr 23 2015 |
| Bootloader Firmware | CB | Feb 19 2007 |
i a la pàgina “BSMS Service Web - Setup” ho confirma,
| Firmware Status | |||
|---|---|---|---|
| Unit Name | Required Firmware | Loaded Firmware | Status |
| BSMS/2 ELCB | unknown | elcb_firmware_150423.gz | not ok |
| BSMS/2 SCB20 | scb20_fpga_00-001-00.bit | scb20_fpga_00-001-00.bit | ok |
| BSMS/2 SLCB/2 | slcb_firmware_090206.hex | slcb_firmware_090206.hex | ok |
Clico a l'enllaç Load new firmware i em descarrego la darrera versió disponible elcb_firmware_210212.gz
del servidor FTP de Bruker, i la instal·lo. Un cop finalitzada la instal·ació del nou firmware. torno a comprovar la versió instal·lada,
| Unit | Version | Date |
|---|---|---|
| ELCB Firmware | 210212 | Feb 12 2021 |
| Bootloader Firmware | CB | Feb 19 2007 |
i a la pàgina “BSMS Service Web - Setup” la columna Status marca que els firmwares de totes les plaques són correctes.
Llavors reinicio TopSpin per comprovar si ja no apareix l'error i malauradament l'error no ha desaparegut.
